Plant GARDEN
How To ▶︎

JA

EN

TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

Search

By Species By Keywords Genes By Markers By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only) Sequences Other Tools

Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015816377.1_cds_XP_016498786.1_12777
CDS Infomation

[gene=LOC107817468] [db_xref=GeneID:107817468] [protein=carotenoid 9,10(9',10')-cleavage dioxygenase-like isoform X3] [protein_id=XP_016498786.1] [location=complement(join(14265..14294,15384..15495,16210..16461,16740..16841,16919..17039,18605..18743,18893..19077,19406..19516,19799..19861,20040..20139,21211..21322,21977..22073,22302..22362))] [gbkey=CDS]
Sequence

ATGGTGAGTTTGTCAGGGTTGGTCCAAATCCAAAATTTGCTCCAGTTGCTGGATATCATT
GGTTTGACGGTGATGGGTACATCTTTTGCAGTCTTGACTTTTCACTTTAGCGTACATAGT
AAATTGTCACAAATCATTTTGGAAAAGAAGTGCCACTACATGATTCATGGCTTGCACATT
AAGGATGGAAAAGCAACATACGTCTCACGTTTTGTGAGGACATCTCGTCTAAAGCAAGAA
GAGTTCTTTGGAGGAGCTAAGTTTATGAAGATTGGAGATCTTAAAGGACTGTTCGGGTTG
TTCTCAGTATACATTTACATGCTCAGGGAAAAGCTGAAAGTTTTGGACACTTCTTATGGA
AATGGCACAGCTAATACAGCTATGATATATCACCACGGGAAGCTTTTGGCTCTTCATGAG
GGTGATAAACCATATGTTGTTAAAGTTCTGGAGGATGGAGACCTTCAAACTCTTGGCATG
CTGGATTATGATAAAAGGTTGCAACATTCCTTTACTGCTCACCCGAAGGTTGACCCTGTA
ACTGGGGAAATGTTTACCTTTGGATACTCGCAGACACCACCTTACGCTACATATAGAGTC
ATATCCAAGGATGGTGTCATGCAAGATCCTGTTCCAATAACTATACCAGCATCTGTTATG
ATGCATGATTTTGCTATTACTGAAAATTATTCAATTATGATGGATCTTCCGTTGTACTTC
AAACCAAAGGAAATGGTGAAAAATAAAAAGCTGGCATACAGCTTTGACCCCACAAAGAAG
GCTCGCTTTGGAATTCTTCCACGCTATGCAAAGAATGAATCCCTAATCAAGTGGTTCGAG
CTTCCTAACTGCTTCATATTCCACAATGCCAATGCTTGGGAGGAGGGAGATGATGTGGTC
TTGATCACTTGCCGTCTGCAGAATCCAGATCTAGATGCGATTAATGGAACTGAAAAAGAA
CAACAGCGTGACGGTTTCACAAATGAGCTGTATGAGATGAGATTCAATATAAAGACCGGT
CTAGCATCACAGAAGAAACTGTCAGAGTCTGCTGTTGATTTTCCACGGGTCAACGAGAAC
TACACTGGAAGGAAGCAACGCTATGTATATGGAACCATTTTAAACCACATGGCCAAGATC
ACAGGAATTGTCAAATTTGATTTGCATGCGGAACCAGAGACTGGAAAAACAAAGCTCGAA
GTCGGTGGTAACGTTCTTGGAATCTTCGACCTTGGACCTGGAAGATTTGGCTCAGAGGCA
ATATTTGTTCCCCGTCAGCCTGGGACAGAATGTGAAGAGGATGATGGGTACTTGATATTG
TTCGTACATGATGAGAACACTGGAAAGTCATCAGTGAACGTAATTGATGCTAAAACAATG
TCAGCCGAACCTGTGGCAGTTGTTGAATTACCCAAAAGAGTTCCATATGGATTCCATGCC
TTCTTTGTCACAGAGGAACAAATACTAGAGCAAGCCAAACTGTGA

Peptide Sequence

PEP ID

XP_016498786.1
PEP Infomation

PREDICTED: carotenoid 9,10(9',10')-cleavage dioxygenase-like isoform X3 [Nicotiana tabacum]
Sequence

MVSLSGLVQIQNLLQLLDIIGLTVMGTSFAVLTFHFSVHSKLSQIILEKKCHYMIHGLHI
KDGKATYVSRFVRTSRLKQEEFFGGAKFMKIGDLKGLFGLFSVYIYMLREKLKVLDTSYG
NGTANTAMIYHHGKLLALHEGDKPYVVKVLEDGDLQTLGMLDYDKRLQHSFTAHPKVDPV
TGEMFTFGYSQTPPYATYRVISKDGVMQDPVPITIPASVMMHDFAITENYSIMMDLPLYF
KPKEMVKNKKLAYSFDPTKKARFGILPRYAKNESLIKWFELPNCFIFHNANAWEEGDDVV
LITCRLQNPDLDAINGTEKEQQRDGFTNELYEMRFNIKTGLASQKKLSESAVDFPRVNEN
YTGRKQRYVYGTILNHMAKITGIVKFDLHAEPETGKTKLEVGGNVLGIFDLGPGRFGSEA
IFVPRQPGTECEEDDGYLILFVHDENTGKSSVNVIDAKTMSAEPVAVVELPKRVPYGFHA
FFVTEEQILEQAKL

Transcript Sequence

Gene sequence data has not been registered.